pod5_filter

Tool for subsetting pod5 files into one or more outputs using a list of read ids

filter_pod5(inputs: List[Path], output: Path, ids: Path, missing_ok: bool, duplicate_ok: bool, force_overwrite: bool) → None

Prepare the pod5 filter mapping and run the repacker

main()

pod5 filter main

parse_ids(ids_path: Path) → Set[str]

Parse the list of read_ids checking all are valid uuids